Hi, Marlene.
PESTICA/SLOMOCO issue should be posted in nitrc site, but I found your post here. You are right. The current SLOMOCO works in linux system not quite well in Mac. By the way, which version of PESTICA/SLOMOCO are you using?
The reason is, a recent version of 3dWarpdrive (in run_correction_slicemocoxy.sh) does not work with single slice motion correction while I found the old version of 3dWarpdrive was working. The latest SLOMOCO includes the old version of 3dWarpdrive command (afni.afni.openmp.v18.3.16). However, I could not find the right version of 3dWarpdrive for Mac. Now, I am updating SLOMOCO package to replace 3dWarpdrive with 3dAllineate, however, the result between 3dWarpdrive and 3dAlliineate are quite different. - I will post it as soon as I confirm it.
-Wanyong
