AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 05, 2022 04:32PM
Hi everyone,
I am working on an emotional go/no-go scanning paradigm. We are interested in brain activity during correct responses to go and no-go stimuli as well as brain activity during omission and commission errors. To accomplish this goal I made vectors for correct go, correct no-go, omission and commission errors for each emotion we studied (happy, angry, fear, and a black box control).
However, this setup has some issues with subjects who scored perfectly or got a score of 0 on one of the tasks would be missing a vector (since they either had no accurate responses for a given emotion and go/no-go state or would have either no omission or no commission errors for a given emotion). To circumvent this problem, I tried to make 'dummy vectors' with timepoints which would then be censored that could 'replace' the missing vectors.
When I tried to run my data using this method we got errors while doing the t-test since there were too many censored-out vectors. The output that resulted didn't make sense (ie there was no brain activation in controls even though I would expect to see some activation in controls during this paradigm). Please let me know if any of you have thoughts regarding how to proceed.
Subject Author Posted

issue with running t-test in afni

ananru April 05, 2022 04:32PM

Re: issue with running t-test in afni

gang April 05, 2022 10:39PM

Re: issue with running t-test in afni

ananru April 08, 2022 05:04PM

Re: issue with running t-test in afni

gang April 09, 2022 12:10PM