AFNI Message Board

History of AFNI updates  

|
May 07, 2022 09:10AM
Hello there;
i am tring to do the group analysis resting-state fmri using the 3dttest manually (because it can not import PyQt4.QtGui).
any way when i type the 3dttest commands to the Ubuntu terminal like this;


#!/bin/tcsh -xef
# created by uber_ttest.py: version 2.0 (December 28, 2017)
# creation date: Wed Feb 19 11:33:21 2020
# ---------------------- set process variables ----------------------
set mask_dset = /home/osman/Deneyler/s01/s01.results/pACC.z+tlrc
set dirA = /home/osman/Deneyler
# specify and possibly create results directory
set results_dir = test.results
if ( ! -d $results_dir ) mkdir $results_dir
# ------------------------- process the data -------------------------
3dttest++ -prefix $results_dir/Flanker-Inc-Con \
-mask $mask_dset \
-setA Inc-Con \
01 "$dirA/s01/s01.results/pACC.z+tlrc[0]" \
02 "$dirA/s02/s02.results/pACC.z+tlrc[0]"




i got this error message!

++ 3dttest++: AFNI version=AFNI_22.1.04 (Apr 18 2022) [64-bit]
++ Authored by: Zhark++
** ERROR: Failed to open mask '-setA'
** FATAL ERROR: Cannot create mask from '-mask' option
** Program compile date = Apr 18 2022




Edited 4 time(s). Last edit at 05/08/2022 06:44AM by osman.
Subject Author Posted

3dttest resting-state fmri group analysis

osman May 07, 2022 09:10AM

Re: 3dttest resting-state fmri group analysis

ptaylor May 09, 2022 10:14AM

Re: 3dttest resting-state fmri group analysis

rick reynolds May 09, 2022 11:39AM

Re: 3dttest resting-state fmri group analysis

osman May 10, 2022 07:43AM

Re: 3dttest resting-state fmri group analysis

ptaylor May 10, 2022 09:14AM

Re: 3dttest resting-state fmri group analysis

rick reynolds May 10, 2022 09:26AM

Re: 3dttest resting-state fmri group analysis

osman May 10, 2022 03:19PM

Re: 3dttest resting-state fmri group analysis

osman May 10, 2022 03:14PM

Re: 3dttest resting-state fmri group analysis

rick reynolds May 10, 2022 03:39PM

Re: 3dttest resting-state fmri group analysis

osman May 10, 2022 03:57PM

Re: 3dttest resting-state fmri group analysis

rick reynolds May 10, 2022 04:07PM

Re: 3dttest resting-state fmri group analysis

osman May 12, 2022 09:16AM

Re: 3dttest resting-state fmri group analysis

rick reynolds May 12, 2022 09:45AM

Re: 3dttest resting-state fmri group analysis

osman May 12, 2022 10:06AM

Re: 3dttest resting-state fmri group analysis

rick reynolds May 12, 2022 10:19AM



Sorry, only registered users may post in this forum.

Click here to login