Thanks, an improving moco over time then :)
Haven't used AFNIs plugin. Does it use a listener on a specific folder to which the scanner sends the data?
I built my own engine using python with the watchdog library/function.
That triggers a chain of events every time a file is detected. And at specific TRs it runs an afni script that provides my a time course / results for whichever TRs I want.
Afni is on a server, accessed via thinlic on the fmrl computer. Stimuls software is also on this server. The analysis server has the scanner export dir mounted on it.