AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ptaylor
February 08, 2023 06:50AM
Howdy-

Hmmm, OK. I ran the following in the Bootcamp data (AFNI_data6/FT_analysis/FT directory) OK, and got the attached image: 
3dTqual -range -automask FT_epi_r1+orig | 1dplot -one -stdin -png NAME

However, if I ran without the extension: 
3dTqual -range -automask FT_epi_r1 | 1dplot -one -stdin -png NAME
... then I got the error you are seeing: 
*** Can't open dataset FT_epi_r1
** FATAL ERROR: Can't read from stdin!

So, whether your input is NIFTI or BRIK/HEAD format, can you try putting the more complete name: NAME.nii, NAME.nii.gz, NAME+orig, NAME+orig.HEAD, etc.?

--pt
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Subject Author Posted

stdin error in 1dplot

RJ February 07, 2023 09:45PM

Re: stdin error in 1dplot Attachments

ptaylor February 08, 2023 06:50AM

Re: stdin error in 1dplot

rick reynolds February 08, 2023 09:24AM

Re: stdin error in 1dplot

rick reynolds February 08, 2023 09:26AM

Re: stdin error in 1dplot

rick reynolds February 08, 2023 09:32AM

Re: stdin error in 1dplot

RJ February 08, 2023 07:34PM