History of AFNI updates  

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February 08, 2023 06:50AM
Howdy-

Hmmm, OK. I ran the following in the Bootcamp data (AFNI_data6/FT_analysis/FT directory) OK, and got the attached image:
3dTqual -range -automask FT_epi_r1+orig | 1dplot -one -stdin -png NAME

However, if I ran without the extension:
3dTqual -range -automask FT_epi_r1 | 1dplot -one -stdin -png NAME
... then I got the error you are seeing:
*** Can't open dataset FT_epi_r1
** FATAL ERROR: Can't read from stdin!

So, whether your input is NIFTI or BRIK/HEAD format, can you try putting the more complete name: NAME.nii, NAME.nii.gz, NAME+orig, NAME+orig.HEAD, etc.?

--pt
Attachments:
open | download - NAME.png (5.6 KB)
Subject Author Posted

stdin error in 1dplot

RJ February 07, 2023 09:45PM

Re: stdin error in 1dplot Attachments

ptaylor February 08, 2023 06:50AM

Re: stdin error in 1dplot

rick reynolds February 08, 2023 09:24AM

Re: stdin error in 1dplot

rick reynolds February 08, 2023 09:26AM

Re: stdin error in 1dplot

rick reynolds February 08, 2023 09:32AM

Re: stdin error in 1dplot

RJ February 08, 2023 07:34PM