AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
April 11, 2023 05:43PM
Cool.

You can set up miniconda/conda even on an HPC, since it doesn't require sudo permissions. Here are notes related to conda and AFNI specifically:
https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/background_install/miniconda.html

Basically, you create a directory of useful programs with dependencies in a very self-contained directory, say in your subfolder of your home directory. I think by just using the conda install recipes you will be set. It can be used to manage more than just Python, but these should be all you would need at the moment for Python 3.*, as noted in the notes above:
"matplotlib>=2.2.3" numpy scipy
... as pylab will come with matplotlib (and you would likely find matplotlib useful for other things, such as the afni_proc.py QC HTML).

--pt
Subject Author Posted

ME-fMRI and RetroTS.py

axlander1 April 10, 2023 04:53PM

Re: ME-fMRI and RetroTS.py

ptaylor April 10, 2023 05:12PM

Re: ME-fMRI and RetroTS.py

axlander1 April 11, 2023 01:40PM

Re: ME-fMRI and RetroTS.py

ptaylor April 11, 2023 05:43PM

Re: ME-fMRI and RetroTS.py

axlander1 April 12, 2023 02:00PM

Re: ME-fMRI and RetroTS.py

ptaylor April 12, 2023 10:41PM