AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 10, 2003 12:02PM
george he wrote:

> rich,
> I would say AFNI is 1/2 pixel off in both in-plane directions
> (R-L and S-I in this case)
> if the information provided by dcdump is correct. The problem
> is that the
> <-105.707\94.3996\111.07> provides 2 coordinates of the
> outside of the corner voxel
> but 1 coordinate of the center of the corner voxel (plane
> position), and AFNI treats all
> 3 as at the center of the corner voxel.
> george

It certainly appears that that's how GE is using the (0020,0032)
field, when you compare it to their proprietary data, but that's
not how I read the DICOM standard:

----------------
C.7.6.2.1.1 Image Position and Image Orientation

The Image Position (0020,0032) specifies the x, y, and z coordinates of the
upper left hand corner of the image; it is the center of the first voxel
transmitted.
-----------------

Do you have any documentation on the GE usage of this attribute,
or of a convention among the MRI manufacturers to use this
attribute in that way? Before I start modifying that code, I'd really
like to have some idea of whether this is a special case or not.

rich
Subject Author Posted

to3d get incorrect position info?

george he September 09, 2003 06:27PM

Re: to3d get incorrect position info?

Rich Hammett September 10, 2003 11:04AM

Re: to3d get incorrect position info?

george he September 10, 2003 11:41AM

Re: to3d get incorrect position info?

Rich Hammett September 10, 2003 12:02PM

Re: to3d get incorrect position info?

george he September 10, 2003 12:43PM

Re: to3d get incorrect position info?

Rich Hammett September 10, 2003 12:55PM

Re: to3d get incorrect position info?

george he September 10, 2003 01:16PM