Here is one of our scripts.
3dANOVA2 \
-type 3 \
-alevels 2 \
-blevels 8 \
-dset 1 1 ../JAB090203/REG_VOLUMES/JAB090203.encod1-3.hit.Gb3+tlrc \
-dset 2 1 ../JAB090203/REG_VOLUMES/JAB090203.encod1-3.miss.Gb3+tlrc \
-dset 1 2 ../JAB093003/REG_VOLUMES/JAB093003.encod1-3.hit.Gb3+tlrc \
-dset 2 2 ../JAB093003/REG_VOLUMES/JAB093003.encod1-3.miss.Gb3+tlrc \
-dset 1 3 ../JAB100703/REG_VOLUMES/JAB100703.encod1-3.hit.Gb3+tlrc \
-dset 2 3 ../JAB100703/REG_VOLUMES/JAB100703.encod1-3.miss.Gb3+tlrc \
-dset 1 4 ../JAB111103/REG_VOLUMES/JAB111103.encod1-3.hit.Gb3+tlrc \
-dset 2 4 ../JAB111103/REG_VOLUMES/JAB111103.encod1-3.miss.Gb3+tlrc \
-dset 1 5 ../JAB111503/REG_VOLUMES/JAB111503.encod1-3.hit.Gb3+tlrc \
-dset 2 5 ../JAB111503/REG_VOLUMES/JAB111503.encod1-3.miss.Gb3+tlrc \
-dset 1 6 ../JAB111803/REG_VOLUMES/JAB111803.encod1-3.hit.Gb3+tlrc \
-dset 2 6 ../JAB111803/REG_VOLUMES/JAB111803.encod1-3.miss.Gb3+tlrc \
-dset 1 7 ../JAB112503/REG_VOLUMES/JAB112503.encod1-3.hit.Gb3+tlrc \
-dset 2 7 ../JAB112503/REG_VOLUMES/JAB112503.encod1-3.miss.Gb3+tlrc \
-dset 1 8 ../JAB112903/REG_VOLUMES/JAB112903.encod1-3.hit.Gb3+tlrc \
-dset 2 8 ../JAB112903/REG_VOLUMES/JAB112903.encod1-3.miss.Gb3+tlrc \
-diskspace \
-fa memory \
-amean 1 encod.hit \
-amean 2 encod.miss \
-adiff 1 2 encod.hit-miss \
-bucket 2ANOVA.Jenc1-3.sub1-8 \
Thanks again for your time!
Jeremy
