AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 21, 2004 12:49PM
excellent reply thankyou yanqioung. That is exactly what I want. After posting the message I realized I consulted with a colleague and confirmed that the main effect of factor B matrix I had constructed would not work.

Here is what we came up with instead. I believe it is equivelent to what you provided but please let me know If I am incorrect.

For the main effect of B I used the following set of contrasts:

1 -1 0 0 0 1 -1 0 0 0
0 1 -1 0 0 0 1 -1 0 0
0 0 1 -1 0 0 0 1 -1 0
0 0 0 1 -1 0 0 0 1 -1


and for the interaction I performed the same transformation on the matrix as you have done:

1 -1 0 0 0 -1 1 0 0 0
0 1 -1 0 0 0 -1 1 0 0
0 0 1 -1 0 0 0 -1 1 0
0 0 0 1 -1 0 0 0 -1 1


This now gives me 4 beta weights for the main effect term and 4 beta weights for the interaction term. In order to perform the group level statistics on this data I plan to take the beta weights from each subject (12) and submit them to a one way anova with 4 levels, each level a beta weight. I am assuming that if the differences revealed by any one of the contrasts is large enough across a sificient number of subjects a main effect should be seen. The resulting statistic would be the final map for that comparison (for both the main effect contrasts and the interaction contrasts). Does this seem reasonable?

KJ
Subject Author Posted

anova interaction

KJ Jantzen January 19, 2004 02:27PM

Re: anova interaction

KJ Jantzen January 19, 2004 02:37PM

Re: anova interaction - DELAY

bob cox January 21, 2004 09:16AM

Re: anova interaction - DELAY

KJ Jantzen January 21, 2004 12:55PM

Re: anova interaction

yanqiong January 21, 2004 12:03PM

Re: anova interaction

KJ Jantzen January 21, 2004 12:49PM

Re: anova interaction

yanqiong January 21, 2004 02:33PM