History of AFNI updates  

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January 28, 2004 03:27PM
I assume: (1) you are running 3dDeconvolve with 3 regressors generated with waver; (2) you model the baseline with a straight line (default or -polort 1); (3) there is only one run in your dataset.

The glt vector for testing punish vs. reward would be

0 0 0 1 -1

The first two 0's correspond to the constant and slope of the baseline. The rest part (0 1 -1) is for the contrast test of punish vs. reward. If you have multiple runs concatenated in the dataset (e.g., 3 runs), you need to multiply the number of those two 0's at the beginning (e.g., 3 X 2 = 6 zeros) in the glt vector.

Gang
Subject Author Posted

glm questions

Avram Holmes January 28, 2004 11:57AM

Re: glm questions

Gang Chen January 28, 2004 12:05PM

Re: glm questions

Avram Holmes January 28, 2004 12:26PM

Re: glm questions

Gang Chen January 28, 2004 12:48PM

Re: glm questions

Avram Holmes January 28, 2004 03:13PM

Re: glm questions

Gang Chen January 28, 2004 03:27PM