Hi all,

I have three ( first echo, second echo and T2* map) diifferent functional data sets which were scanned almost at the same time of one subject. T2* map images are very poor quality as there are lots noises outside of the brain. I am wondering if I can apply 3dvolreg to do motion correcton on this data set. So what I paln to do:

First I do motion correction on the first or second echo data

3dvolreg -base '01+orig[0]' -1Dfile 01mc.1D -prefix 01mc 01+orig

Then: I woudl like to apply to this 01mc.1D file to the t2* map file for achiving the motion correcton data.

I don't how to do. Or any other way I can try. Any suggestion will be greatly appreciated,

Thanks,

Lucy