AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Ziad S. Saad
April 26, 2004 05:29PM
Hi Kevin,

Autorange value comes from the maximum value in the data set. For voxels with very little or no signal in them, the Hilbert Transform of the cross-correlation curve might not cross zero at a lag < stimulus period. Also, the algorithm stops searching for a zero crossing whenever the lag exceeds 1/3 the duration of the time course. In both cases, you'll end up with a large (but meaningless delay value which when multiplied by 2pi/period results in delays > 2 pi radians. These values are meaningless but you don't (should not) use them anyway because the cross correlation coefficient for such voxels in ~= 0 (i.e. no significant activation at that location).

You should set the range manually to 2pi for your data.

cheers.
ziad
Subject Author Posted

3ddelay > radians

kevin desimone April 21, 2004 01:02PM

Re: 3ddelay > radians

Ziad S. Saad April 21, 2004 02:05PM

Re: 3ddelay > radians

Ziad S. Saad April 21, 2004 05:45PM

Re: 3ddelay > radians

Kevin DeSimone April 26, 2004 04:23PM

Re: 3ddelay > radians

Ziad S. Saad April 26, 2004 05:29PM