AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 25, 2004 01:45PM
good questions indeed about our data...
i was confused at first about 46 being number of slices, because I was doing all the acquisitions and I know that slice thickness in out epi scans is .5 cm and the total number of slices was less than ~35, BUT then i realized that we did all the pre-processing in SPM and normalized it to 3x3x3 mm voxel size and this way thare are 46 slices.
so what numbers should I used for to3d to work properly and do the error checking?
as for the second question, entire volume was not acquired at the same time but SPM normalization kind of messes it up anyway... in case I do wanna let to3d know about, alt+z or something like it would be the way to do it?
Subject Author Posted

a simple question from a newbie about converting from SPM to AFNI formats

Renat May 25, 2004 11:35AM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Renat May 25, 2004 11:38AM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Robert Cox May 25, 2004 11:48AM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Renat May 25, 2004 12:30PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Renat May 25, 2004 12:39PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

rick reynolds May 25, 2004 12:57PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Renat May 25, 2004 01:45PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

rick reynolds May 25, 2004 02:15PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Renat May 25, 2004 02:25PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

rick reynolds May 25, 2004 03:29PM

Re: a simple question from a newbie about converting from SPM to AFNI formats

Robert Cox May 25, 2004 03:32PM

thank you, guys! you really helped me through this first step :)

Renat May 25, 2004 04:31PM