AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 02, 2005 11:25AM
I presume that you have put the AFNI directory into your path, as described in [afni.nimh.nih.gov] or elsewhere.

The next step on the road to becoming an AFNI Certified Expert (ACE) is to create a file called .afnirc in your home directory -- the directory you are 'in' when you login and open a terminal window. Here is a simple .afnirc file:

***ENVIRONMENT
AFNI_hotcolor = blue // changes 'Done' button color
AFNI_LEFT_IS_LEFT = YES // subject left on screen left
AFNI_PLUGINPATH = /Users/rwcox/abin

Each line sets an 'environment' variable, which is a Unix setting. These are described more fully in the README.environment and README.setup files (which you should find in you AFNI binary directory). You can copy these 4 lines into your .afnirc file to begin your setup. The stuff after the '//' at the end of the lines is commentary.

The AFNI_PLUGINPATH environment variable is the name of the directory where AFNI will search for plugins when it starts up. In the example above, this is my AFNI binary directory on my Mac. You will have to change this, unless your login name is 'rwcox', to wherever you stored the AFNI binaries. If AFNI_PLUGINPATH is not set, then AFNI searches your path instead -- if you get a message that it found some plugins, then it succeeded. However, searching the entire path is slow, so setting AFNI_PLUGINPATH to the correct location will speed up your startup.

Don't worry about the 'anat parent' messages. They probably won't have any effect.

bob cox

Subject Author Posted

New user - problem with path

Juliana February 02, 2005 10:39AM

Re: New user - problem with path

Robert Cox February 02, 2005 11:25AM

Re: New user - problem with path

Juliana February 02, 2005 02:30PM

Re: New user - problem with path

Robert Cox February 02, 2005 02:55PM

Re: New user - problem with path

Juliana February 04, 2005 01:00PM