AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 20, 2005 09:07AM
Hi Mithun,

You can use the '-1clust_order' option with 3dclust to get a
list of clusters, sorted by volume of cluster. Note that the
options is actually explained in '3dmerge -help', but also
applies to 3dclust.

This dataset can be used as the mask dataset with 3dmaskave
to output the average (etc.) of values over a mask. The
3dmaskdump program will output the individual values of a
dataset (over a mask), which does not seem to be what you
want, unless you want to then import them into excel, or
something like that.

But it seems like 3dmaskave should do what you are looking
to do.

- rick

Subject Author Posted

Weird 3dclust output?

Mithun Mukherjee July 12, 2005 02:59PM

Re: Weird 3dclust output?

Vince July 12, 2005 03:55PM

Re: Weird 3dclust output?

Mithun Mukherjee July 12, 2005 04:17PM

Re: Weird 3dclust output?

Robert Cox July 12, 2005 04:31PM

Re: Weird 3dclust output?

Mithun Mukherjee July 12, 2005 04:47PM

Re: Weird 3dclust output?

rick reynolds July 12, 2005 05:33PM

Re: Weird 3dclust output?

Mithun Mukherjee July 13, 2005 10:19AM

Re: Weird 3dclust output?

rick reynolds July 13, 2005 10:25AM

Re: Weird 3dclust output?

Mithun Mukherjee July 18, 2005 04:11PM

Re: Weird 3dclust output?

rick reynolds July 20, 2005 09:07AM

Re: Weird 3dclust output?

Mithun Mukherjee July 20, 2005 11:50AM

Re: Weird 3dclust output?

Mithun Mukherjee August 31, 2005 12:16PM