AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
August 31, 2005 12:16PM
>Thanks Rick and hello again,
>
>On a related note, I was wondering if it is possible to obtain the >corresponding avg. z-score for each cluster through 3dclust ? Maybe in >conjunction with 3dmaskdump?
>
>Thanks for your help.
>Mithun

I just found an easier way to do this and thought I'd share my simple but thrilling discovery with the rest of the world :).

3dclust -1dindex 5 -1tindex 5 -1thresh $zthresh -noabs $rmm $vmul dataset+orig

where subbrick 5 is the z-stat subbrick.
The 11th column, "Mean", of the 3dclust output, contains the average z-scores per cluster. Weehoo!
Subject Author Posted

Weird 3dclust output?

Mithun Mukherjee July 12, 2005 02:59PM

Re: Weird 3dclust output?

Vince July 12, 2005 03:55PM

Re: Weird 3dclust output?

Mithun Mukherjee July 12, 2005 04:17PM

Re: Weird 3dclust output?

Robert Cox July 12, 2005 04:31PM

Re: Weird 3dclust output?

Mithun Mukherjee July 12, 2005 04:47PM

Re: Weird 3dclust output?

rick reynolds July 12, 2005 05:33PM

Re: Weird 3dclust output?

Mithun Mukherjee July 13, 2005 10:19AM

Re: Weird 3dclust output?

rick reynolds July 13, 2005 10:25AM

Re: Weird 3dclust output?

Mithun Mukherjee July 18, 2005 04:11PM

Re: Weird 3dclust output?

rick reynolds July 20, 2005 09:07AM

Re: Weird 3dclust output?

Mithun Mukherjee July 20, 2005 11:50AM

Re: Weird 3dclust output?

Mithun Mukherjee August 31, 2005 12:16PM