AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 12, 2006 09:24AM
Hey all,

I'm running dimon on an anatomical scan, 158 files, 1 slice per file. Our images are in DICOM .IMA format, so my command line entry was "dimon -dicom_org -infile_prefix 'CIVS_PILOT.MR.0002.*', where the number 0002 denotes anatomical scans. Dimon has run nearly 24 hours, and has not stopped. All I get is a terminal full of dots indicating progress.

The pre-processing output is this:
Dimon running, use <ctrl-c> to quit...

-- scanning for first volume
-- checking 158 potential DICOM files... 100%
++ found 158 DICOM files
-- dicom sort : 2 inversions, 0 non-DICOM files
(dicom_org was useful)

And then come the dots. What am I doing wrong, or is there just a huge amount of processing time involved? I just had to kill the X11 terminal because it was eating up a lot of processor power.

Thanks a lot,
Dylan
Subject Author Posted

Dimon run time in offline mode?

Dylan Bargatze May 12, 2006 09:24AM

Re: Dimon run time in offline mode?

Dylan Bargatze May 12, 2006 09:32AM

Re: Dimon run time in offline mode?

rick reynolds May 12, 2006 09:42AM

Re: Dimon run time in offline mode?

Dylan Bargatze May 12, 2006 09:47AM

Re: Dimon run time in offline mode?

Dylan Bargatze May 12, 2006 10:37AM

Re: Dimon run time in offline mode?

rick reynolds May 12, 2006 10:41AM

Re: Dimon run time in offline mode?

Dylan Bargatze May 12, 2006 10:59AM

Re: Dimon run time in offline mode?

rick reynolds May 12, 2006 11:06AM