AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 19, 2007 02:19PM
Hi Mike,

Perhaps your volume data is not overlaying the Surface Volume
dataset (because either it is only a partial volume, or because
they are not aligned). In such a case, 3dVol2Surf does not give
results for those nodes that do not overlap any voxels.

If that is the case, but you want to proceed, consider the
-oob_value option in 3dVol2Surf, to include output for those
nodes that are "out of bounds" (outside the boundaries of your
'-grid_parent' dataset).

On a similar note, there is an '-oom_value' option for the case
where you apply a mask, but want output for all of the nodes.

See '3dVol2Surf -help' for more details.

- rick

Subject Author Posted

Cross-Subject Analysis in SUMA

Mike Arcaro September 13, 2007 06:20PM

Re: Cross-Subject Analysis in SUMA

Ziad September 14, 2007 03:38PM

Re: Cross-Subject Analysis in SUMA

Mike Arcaro September 17, 2007 12:48PM

Re: Cross-Subject Analysis in SUMA

Ziad September 18, 2007 09:36AM

Re: Cross-Subject Analysis in SUMA

Ziad September 18, 2007 10:29AM

Re: Cross-Subject Analysis in SUMA

Anthony September 18, 2007 02:49PM

Re: Cross-Subject Analysis in SUMA

Mike Arcaro September 19, 2007 12:54PM

Re: Cross-Subject Analysis in SUMA

rick reynolds September 19, 2007 02:19PM

Re: Cross-Subject Analysis in SUMA

Ziad September 20, 2007 09:03AM

Re: Cross-Subject Analysis in SUMA

Mike Arcaro September 20, 2007 06:34PM