Dear AFNI team,
I'm hung up here on a basic issue of using column selection from a 1D file.
e.g.
>> 3dDeconvolve -input \
${SUBJ}mem_pp1_align+orig \
-mask full_mask+orig \
-nfirst 0 -polort 3 \
-num_stimts 2 -basis_normall 1 \
-stim_times 1 'reffunc.1D[0]' 'GAM' -stim_label 1 P.T \
-stim_times 2 'reffunc.1D[1]' 'GAM' -stim_label 2 P.ED \
-fitts fit_ts -errts error_ts \
-xjpeg glm_matrix.jpg \
-tout -fout -bucket glm_out
generates:
>> ** FATAL ERROR: '-stim_times 1' can't read any data from file 'reffunc.1D[0]'
but then doing a 1dplot on this column from the 1D file works just fine.
>> 1dplot 'reffunc.1D[0]'
>> (plot comes up fine)
Why is 3dDeconvolve failing to select the column from the 1D file if 1dplot is able to do this?
Thanks,
Jarrod