AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 18, 2008 04:48PM
Thanks for your helpful comment, Rick

I have a very basic question about the structure of the stimulus timing file (in -stim_times): where to start counting. My experiment is a rapid event-related, with 8 blocks. There are 9 conditions randomized in each block, presented 4 trilas/condition/block. However, we are interested in analyzing only correct trials. Each block is 180TRs long, and TR = 2 sec.

My stimulus timing file looks like (in .txt format, only correct trials)
39 149
7 79 241 309
79 109 131 249
237 271 297 335
15 265
27 67 245 273
71 89 291
265

where each row represents one block, and within that, I have timings of stimulus onset in sec. e.g.39 (1st block, 1st trial) means the onset of the stimulus at 39th sec (onset of the 1st TR is "1"). Is this the right way to count, or does this have to be in TR? I'm not cropping first or last data points.

Thank you very much for your help! Akiko
Subject Author Posted

3dDeconvolve beta weights

Akiko Ikkai February 14, 2008 06:28PM

Re: 3dDeconvolve beta weights

rick reynolds February 14, 2008 09:15PM

Re: 3dDeconvolve beta weights

Akiko Ikkai February 18, 2008 04:48PM

Re: 3dDeconvolve beta weights

rick reynolds February 18, 2008 05:51PM

Re: 3dDeconvolve beta weights

Akiko Ikkai February 29, 2008 03:25PM

Re: 3dDeconvolve beta weights

rick reynolds February 29, 2008 03:38PM