AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Daniel Glen
April 28, 2008 01:45PM
Atlas masks may be specified as datasets for most AFNI commands, so you can use that in a simple 3dcalc command.

3dcalc -a roi+tlrc. -b 'TT_Daemon::amygdala' -expr 'a * step(b)' -prefix 'roi_mask_amyg'

For some other ideas on using ROIs and atlas masks, you can see this posting:
[afni.nimh.nih.gov]
Subject Author Posted

ROI: combine anatomical and functional maps?

Jennifer April 28, 2008 12:12PM

Re: ROI: combine anatomical and functional maps?

Daniel Glen April 28, 2008 01:45PM

Re: ROI: combine anatomical and functional maps?

Jennifer April 28, 2008 02:47PM

Re: ROI: combine anatomical and functional maps?

Dan May 01, 2008 11:32AM

Re: ROI: combine anatomical and functional maps?

rick reynolds May 01, 2008 12:02PM