afni.nimh.nih.gov

Hi all,

If I want to create a separate binary mask using 3dAutomask instead of running the –automask option in 3dDWItoDT, what parameters I use? Using the default parameters in 3dAutomask does not generate a mask identical to the output of 3dDWItoDT -automask.

Thanks in advance for your help.
Sunita