AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 30, 2008 03:41PM
We have a multi session study where we want to align the EPIs from session2 to the anatomical from session 1. I tried to use align_epi_anat.py with the epi2anat option to do this. For the anat I used the anatomical from session 1. When I do this, it doesnt seem to work very well.

Can align epi anat be used for very large translations. For example, our anatomical from session 1 might be nowhere close to the functionals from session 2, and it seems like the program doesnt make the large movement required to align the 2.
Subject Author Posted

align epi anat

Michael Amlung October 30, 2008 03:41PM

Re: align epi anat

Daniel Glen October 30, 2008 03:54PM

Re: align epi anat

Michael Amlung October 30, 2008 04:10PM

Re: align epi anat

Michael Amlung October 30, 2008 04:30PM

Re: align epi anat

Michael Amlung October 30, 2008 04:32PM

Re: align epi anat

Daniel Glen October 30, 2008 05:14PM

Re: align epi anat

Michael Amlung October 30, 2008 05:35PM

Re: align epi anat

michael amlung November 03, 2008 03:47PM

Re: align epi anat

Daniel Glen November 03, 2008 04:10PM

Re: align epi anat

Michael Amlung November 04, 2008 09:38AM

Re: align epi anat

Michael Amlung November 04, 2008 09:43AM