rick reynolds wrote:
> It is odd for DELTA to be bad when 3dinfo correctly shows
> 2mm voxels. Would you be willing to upload those datasets?
>
> Regarding the orientation, you might want to run 3drefit
> -orient RPI on them, so AFNI programs know which orientation
> they are supposed to have.
Will do.
>
> It is disturbing that FSL is still creating datasets with
> sform_code = qform_code = 0 in them. That defeats the entire
> purpose of using NIfTI (to define the data location in space
> between packages). You might even consider asking them about
> that, but it is of course up to you.
This analysis was performed using fsl 4.0. It may have changed in fsl 4.1, but I don't know as I've not had time to perform VBM in the latest version.
>
> Anyway, if you would be willing to upload the data, I'll try
> to see what is going on with the DELTA values.
I sent you an email about that.
Bye,
Colm.