AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 17, 2008 12:28PM
We've done a little realtime fMRI using AFNI with the goal of guiding MRS voxel selection on our Varian 4T. Our reconstruction is in house IDL code and the images are fed to the plugin using IDL's sockets.

The unanticipated complication was not being able to send individual volumes to the plugin one at a time (unless I missed how to do that). Keeping the iochan alive between volumes, means that either everything has to be driven by IDL, or we have to implement some other communication protocol with an intermediate program. What I'm trying to say is that it was a more overhead to maintain the iochan state between volumes, etc and in retrospect I don't really see why it was necessary. It could have been much easier if rtfeedme had a mode to simply append volumes to the end of the growing realtime imaging dataset. As a bonus, if rtfeedme did that, then it would be easier to experiment with data preprocessing scripts.

--judd
Subject Author Posted

Realtime AFNI users! Feedback requested!

bob cox November 30, 2008 09:47AM

Re: Realtime AFNI users! Feedback requested!

Colm Connolly December 01, 2008 05:05AM

Re: Realtime AFNI users! Feedback requested!

Prantik Kundu December 02, 2008 12:37PM

Re: Realtime AFNI users! Feedback requested!

Judd Storrs December 17, 2008 12:28PM

Re: Realtime AFNI users! Feedback requested!

rick reynolds December 17, 2008 12:35PM

Re: Realtime AFNI users! Feedback requested!

Grant January 15, 2009 12:22AM