I am at the last step of the doc. on functional connectivity analysis.
This is the error code I get when I try to run this program:
++ 3dttest: AFNI version=AFNI_2008_02_01_1144 (Feb 26 2008) [32-bit]
** FATAL ERROR: 3dttest: value after -base1 is illegal!
./TCORRff.txt: line 6: s1_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 7: s5_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 8: s6_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 9: s7_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 10: s8_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 11: s9_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 12: s10_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 13: s11_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 14: s12_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 15: s13_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 16: s14_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 17: s15_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 18: s16_ff_Z_DLPFC+tlrc: command not found
./TCORRff.txt: line 19: s17_ff_Z_DLPFC+tlrc: command not found
Here is my script:
3dttest -prefix Grp_t -base1 0\
-set2\
s1_ff_Z_DLPFC+tlrc
s5_ff_Z_DLPFC+tlrc
s6_ff_Z_DLPFC+tlrc
s7_ff_Z_DLPFC+tlrc
s8_ff_Z_DLPFC+tlrc
s9_ff_Z_DLPFC+tlrc
s10_ff_Z_DLPFC+tlrc
s11_ff_Z_DLPFC+tlrc
s12_ff_Z_DLPFC+tlrc
s13_ff_Z_DLPFC+tlrc
s14_ff_Z_DLPFC+tlrc
s15_ff_Z_DLPFC+tlrc
s16_ff_Z_DLPFC+tlrc
s17_ff_Z_DLPFC+tlrc
Do I need to put in a different value for my -base1