AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Jayna Amting
February 02, 2009 09:04AM
Hi Daniel,

Thanks very much for your help. We do a 3dwarp to de-oblique the dataset. I found at all of our files pre deoblique have the same I-S axis voxel number, but the 3dwarp increases the number of voxels, and so our slice number would increase.

Now that I know why this is occurring what can I do? What are the consequences of having differing slice numbers for different subjects? Also is there anyway we can change it back to a standardized slice number for every subject or a way to leave out the de-oblique?

Thanks,
Jayna
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Subject Author Posted

3dZcut slice number

Jayna Amting January 30, 2009 01:33PM

Re: 3dZcut slice number

Daniel Glen January 30, 2009 03:12PM

Re: 3dZcut slice number

Jayna Amting February 02, 2009 09:04AM

Re: 3dZcut slice number

Daniel Glen February 02, 2009 09:35AM

Re: 3dZcut slice number

Jayna Amting February 02, 2009 11:19AM