AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 24, 2009 06:22PM
> From my reading, the F statistic associated with -fcoef is the significance of
> the overall regression, not the significance of the individual parameter. By
> contrast, the t-statistic associated with -tcoef is the significance of the
> individual parameter.

You're right. I totally forgot about that. Yes, -tcoef is what you want.

> Now imagine a situation where a voxel has some type of waveform in between
> a linear and a quadratic. The ttest for that voxel might be significant for both
> regressors. Then the question is: Which regressor does it look most like? Does
> it look significantly more linear than quadratic or more quadratic than linear?
>
> How do I test each voxel to find out which ones have significantly more
> variance accounted for by the linear regressor than the quadratic regressor
> and which ones have significantly more variance accounted for by the
> quadratic regressor than the linear regressor?

OK, that's clearer. In your model

Y = b_0 + b_1 * X + b_2 X^2 + e

you have a t-statistic for b_1 and one for b_2. The t-statistic squared would be the corresponding F-statistic, which can be interpreted as the amount of variability accounted for each regressor (trend in this case) among the total variability in the data in marginal sense (a full model versus one with that regressor removed). So you could compare the relative magnitude between the two F-statistics, but I can't think of a way to test the significance about their difference.

> Would a ttest on the parameter estimates themselves be correct? In that
> case, I am worried that the parameter estimates for a linear versus
> quadratic trend might be affected by the different scales used to code for the
> linear vs the quadratic waveforms.

Yeah, the problem about testing b_1 - b_2 is that they have different dimensions and it's not mathematically interpretable.

Gang
Subject Author Posted

3dRegAna-comparing linear versus nonlinear vectors

Christine Smith March 23, 2009 06:29PM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Bob Cox March 24, 2009 08:34AM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Gang Chen March 24, 2009 10:08AM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Christine Smith March 24, 2009 01:14PM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Gang Chen March 24, 2009 01:40PM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Christine Smith March 24, 2009 05:57PM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Gang Chen March 24, 2009 06:22PM

Re: 3dRegAna-comparing linear versus nonlinear vectors

Pat Bedard March 24, 2009 08:02PM