AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 13, 2009 06:23AM
Hello,

I did the context-dependent correlation analysis according to the afni website [afni.nimh.nih.gov] and got the warning message that my SEED input file which is inserted as a regressor on step 6 (Regression analysis) has 3 columns. Has that ever occurred to someone before? And is this problematic?

In fact, columns 2 and 3 consist of 0s only. Should I eliminate these columns?

Here are the 3dinfo specifications of the file:

Dataset File: SEED_ts_C1_5392.1D
Identifier Code: A1D_TWYyGc6gyc7RFMepbIdREQ Creation Date: Mon Apr 13 05:19:21 2009
Dataset Type: Anat Bucket (-abuc)
Byte Order: LSB_FIRST {assumed} [this CPU native = LSB_FIRST]
Storage Mode: AFNI .1D file
Storage Space: 5040 (5.0 thousand) bytes
Data Axes Tilt: Unspecified, assumed plumb
Data Axes Orientation:
first (x) = Right-to-Left
second (y) = Anterior-to-Posterior
third (z) = Inferior-to-Superior [-orient RAI]
R-to-L extent: 0.000 -to- 419.000 [L] -step- 1.000 mm [420 voxels]
A-to-P extent: 0.000 -to- 0.000 -step- 1.000 mm [ 1 voxels]
I-to-S extent: 0.000 -to- 0.000 -step- 1.000 mm [ 1 voxels]
Number of values stored at each pixel = 3
-- At sub-brick #0 '?' datum type is float
-- At sub-brick #1 '?' datum type is float
-- At sub-brick #2 '?' datum type is float

Thank you very much,
Jana
Subject Author Posted

context-dependent correlation analysis

Jana April 13, 2009 06:23AM

Re: context-dependent correlation analysis

Gang Chen April 13, 2009 03:34PM

Re: context-dependent correlation analysis

Jana April 14, 2009 03:55PM