History of AFNI updates  

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son
May 13, 2009 11:00PM
hi gang

more question.

when group ICA, I was run as follows

1.# reduce the size of the time dimension using PCA
pca = ('3dpc -vmean -vnorm -reduce 20 SYHPCA_+f+ -prefix SYHPCA subject+tlrc')

2.# concatenate the reduced data from all subjects into a matrix
pcacat = ('3dTcat -session . -prefix SYHPCA_concat SYHPCA_20081127-1+tlrc SYHPCA_20081211+tlrc SYHPCA_20081218+tlrc ')

3.# reduce this matrix to N (the number of components to be estimated)
pca = ('3dpc -pcsave 10 -prefix SYHPCA_reduce_dimens SYHPCA_concat+tlrc')

question.
In Number1
when reduce Time dimension from individual subject.
what i choose the option -reduce or -pcsave?

In Number2
when concatenate the reduced data from all subjects

1 and 2, any type of concatenate data?

1. A subject [0.....50] + B subject[51...100]+c subject[101...150]=150(serial)

2. A subject[0.......50]
+
B subject[0.......50] =150(parallel)
+
C subject[0.......50]
Subject Author Posted

Group analysis.

son April 25, 2009 01:38AM

Re: Group analysis.

Gang Chen April 27, 2009 02:32PM

Re: Group analysis.

son April 29, 2009 12:05AM

Re: Group analysis.

son April 29, 2009 01:23AM

Re: Group analysis.

Bob Cox April 29, 2009 08:51AM

Re: Group analysis.

son April 30, 2009 09:02PM

Re: Group analysis.

Gang Chen May 01, 2009 04:55PM

Re: Group analysis.

son May 03, 2009 10:22PM

Re: Group analysis.

son May 13, 2009 11:00PM

Re: Group analysis.

Gang Chen May 14, 2009 06:01PM

Re: Group analysis.

son May 14, 2009 09:52PM

Re: Group analysis.

Gang Chen May 15, 2009 04:57PM

Re: Group analysis.

son May 17, 2009 02:42AM

Re: Group analysis.

son May 18, 2009 08:21PM