AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
Daniel Glen
June 25, 2009 04:24PM
The -tlrc_apar option requires the previous step of @auto_tlrc to be applied to an anatomical dataset. The align_epi_anat.py script extracts the affine transformation from that Talairached anatomical dataset and applies it in combination with the transformation computed for the alignment of the epi to the anat dataset (and also with an oblique transformation if one was used). The combined transformation matrix is applied to the original EPI datasets (base and child epi) to create Talairached and aligned EPI datasets.
Subject Author Posted

align_epi_anat.py

Brent June 24, 2009 03:53PM

Re: align_epi_anat.py

Daniel Glen June 24, 2009 04:20PM

Re: align_epi_anat.py

Brent June 25, 2009 04:07PM

Re: align_epi_anat.py

Daniel Glen June 25, 2009 04:24PM

Re: align_epi_anat.py

Brent June 25, 2009 04:31PM

Re: align_epi_anat.py

Daniel Glen June 25, 2009 04:37PM

Re: align_epi_anat.py

Brent June 26, 2009 08:42AM

Re: align_epi_anat.py

Brent June 26, 2009 08:55AM

Re: align_epi_anat.py

Daniel Glen June 26, 2009 11:19AM