AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
June 19, 2012 08:57AM
OK, trying to compile, using the Makefile.linux_openmp_64 as a base.

Have edited the file in a few ways:
commented this
# USE_LOCAL_X_TREE = 1

uncommented this:
USE_LESSTIF = 1

This has -V 34 in it and would not compile - there is no -V switch? Tried -v and then it didn't like the 34.

CCOLD = /usr/bin/gcc -O2 -m64 -fPIC -DREAD_WRITE_64 -DLINUX2 $(CEXTRA)


Current error:

/bin/rm -f afni
/usr/bin/gcc -O2 -m64 -fPIC -DREAD_WRITE_64 -DLINUX2 -Wcomment -Wformat -DUSE_TRACING -DHAVE_XDBE -DDONT_USE_XTDESTROY -DUSING_LESSTIF -o afni afni.o afni_func.o afni_widg.o afni_warp.o afni_fimmer.o afni_slice_short.o afni_slice_float.o afni_filer.o afni_slice_byte.o afni_slice_complex.o afni_pcor.o afni_pcor_float.o afni_transforms.o pbar.o afni_graph.o afni_plugin.o afni_cluster.o parser.o parser_int.o afni_plugout.o afni_fimfunc.o afni_setup.o afni_receive.o mcw_graf.o afni_splash.o afni_pplug_env.o afni_pplug_2dfunc.o afni_friends.o afni_ttren.o afni_pplug_1dfunc.o afni_driver.o afni_niml.o afni_sumafunc.o afni_slice_rgbyte.o afni_version.o afni_lock.o afni_vol2surf.o afni_pplug_instacorr.o afni_pplug_instacalc.o -rdynamic -L. -L/usr/lib64 -lmrix -lcoxplot -lmri -lvolpack libXmHTML.a libjpeg.a -lmri -lf2c /usr/lib64/libXm.a /usr/lib64/libXt.a -lXft -lXp -lXpm -lXext -lXmu -lSM -lICE -lX11 -lpng -ljpeg -lz /usr/lib64/libexpat.a -lm -ldl -lc -lm -lc
gcc: error: /usr/lib64/libXm.a: No such file or directory
gcc: error: /usr/lib64/libXt.a: No such file or directory
gcc: error: /usr/lib64/libexpat.a: No such file or directory
make: *** [afni] Error 1
[root@bigfoot afni_src]#


Those are installed! :::

[root@bigfoot afni_src]# ls -l /usr/lib64/libexpat.*
lrwxrwxrwx. 1 root root 17 Jun 19 06:32 /usr/lib64/libexpat.so -> libexpat.so.1.6.0
lrwxrwxrwx. 1 root root 17 May 22 15:39 /usr/lib64/libexpat.so.1 -> libexpat.so.1.6.0
-rwxr-xr-x. 1 root root 168336 Mar 26 05:14 /usr/lib64/libexpat.so.1.6.0
[root@bigfoot afni_src]# ls -l /usr/lib64/libXt.*
lrwxrwxrwx. 1 root root 14 Jun 17 05:01 /usr/lib64/libXt.so -> libXt.so.6.0.0
lrwxrwxrwx. 1 root root 14 May 22 15:40 /usr/lib64/libXt.so.6 -> libXt.so.6.0.0
-rwxr-xr-x. 1 root root 415704 Mar 15 16:35 /usr/lib64/libXt.so.6.0.0
[root@bigfoot afni_src]# ls -l /usr/lib64/libXm.*
lrwxrwxrwx. 1 root root 14 Jun 17 05:21 /usr/lib64/libXm.so -> libXm.so.2.0.1
lrwxrwxrwx. 1 root root 14 Jun 17 05:21 /usr/lib64/libXm.so.2 -> libXm.so.2.0.1
-rwxr-xr-x. 1 root root 1610304 Jan 14 00:32 /usr/lib64/libXm.so.2.0.1
[root@bigfoot afni_src]#
Subject Author Posted

Compile Error

James Patterson June 17, 2012 07:58AM

Re: Compile Error

James Patterson June 17, 2012 04:33PM

Re: Compile Error

ziad June 17, 2012 10:32PM

Re: Compile Error

James Patterson June 18, 2012 07:02AM

Re: Compile Error

rick reynolds June 18, 2012 07:59AM

Re: Compile Error

James Patterson June 18, 2012 12:40PM

Re: Compile Error

rick reynolds June 18, 2012 12:52PM

Re: Compile Error

James Patterson June 19, 2012 06:44AM

Re: Compile Error

James Patterson June 19, 2012 08:57AM

Re: Compile Error

Daniel Glen June 19, 2012 01:48PM

Re: Compile Error

James Patterson June 19, 2012 05:52PM

Re: Compile Error

rick reynolds June 19, 2012 08:53PM

Re: Compile Error

James Patterson June 20, 2012 02:31PM

Re: Compile Error

rick reynolds June 20, 2012 03:07PM

Re: Compile Error

James Patterson June 20, 2012 08:10PM