AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 17, 2012 03:56PM
Hi Gang

OK I'll try the AM2 procedure.

1- But how do I set the stimfiles. I have 20 trials for each 8 blocks for each subject. Does each trial get a number related to the covariate (reaction time, RT) I want to account for ? would it be: time_of_trial * RT_for_that_trial
0*1.1
10*0.77
20*0.55
30*0.87
40*0.23
50*1.08...and so on for 20 trials??

So eah trial would get a different RT?

2- And what about testing for a quadratic effect also? Or should I just run 3ddeconvolve to acount for RT and then test for quadratic effect at group level?

3- The output will be 2 beta and 2 t-stat for each of the regressor, the mean and the mean*AM? The 1st one is the same as if I had used the -stim_times option?

pat
Subject Author Posted

Remove covariate from Regression

patrick bedard September 11, 2012 02:13PM

Re: Remove covariate from Regression

gang September 11, 2012 04:57PM

Re: Remove covariate from Regression

patrick bedard September 12, 2012 10:28AM

Re: Remove covariate from Regression

gang September 13, 2012 04:09PM

Re: Remove covariate from Regression

patrick bedard September 14, 2012 01:27PM

Re: Remove covariate from Regression

gang September 17, 2012 07:17AM

Re: Remove covariate from Regression

patrick bedard September 17, 2012 03:56PM

Re: Remove covariate from Regression

gang September 18, 2012 12:33PM

Re: Remove covariate from Regression

patrick bedard September 18, 2012 02:30PM

Re: Remove covariate from Regression

gang September 18, 2012 04:43PM

Re: Remove covariate from Regression

patrick bedard September 18, 2012 05:33PM