AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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patrick bedard
September 18, 2012 05:33PM
Gang
OK but how do I script this to test for quadratic effect?
Do I use numbers (ie regressors of the quadratic fit, [-7,-1, 3, 5, 5, 3, -1, -7]) in the 2nd column of the model.txt file?

Data:Volume
Output:LME_A1-8_NoCOV
MASK:/Volumes/Data/pbedard/data/visuomotor/scripts_group/gr_14subj_mask_NoRd+tlrc
Model:Cond
COV:
RanEff:1
VarStr:0
CorStr:0
SS:sequential
Condi
Subj Cond InputFile
s1 -7 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A1-null+tlrc
s1 -1 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A2-null+tlrc
s1 3 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A3-null+tlrc
s1 5 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A4-null+tlrc
s1 5 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A5-null+tlrc
s1 3 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A6-null+tlrc
s1 -1 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A7-null+tlrc
s1 -7 /Volumes/Data/pbedard/data/visuomotor/decon_Mod8X/subbriks_ret/s1_special_20_Mod8X_A8-null+tlrc
....
s2........
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Subject Author Posted

Remove covariate from Regression

patrick bedard September 11, 2012 02:13PM

Re: Remove covariate from Regression

gang September 11, 2012 04:57PM

Re: Remove covariate from Regression

patrick bedard September 12, 2012 10:28AM

Re: Remove covariate from Regression

gang September 13, 2012 04:09PM

Re: Remove covariate from Regression

patrick bedard September 14, 2012 01:27PM

Re: Remove covariate from Regression

gang September 17, 2012 07:17AM

Re: Remove covariate from Regression

patrick bedard September 17, 2012 03:56PM

Re: Remove covariate from Regression

gang September 18, 2012 12:33PM

Re: Remove covariate from Regression

patrick bedard September 18, 2012 02:30PM

Re: Remove covariate from Regression

gang September 18, 2012 04:43PM

Re: Remove covariate from Regression

patrick bedard September 18, 2012 05:33PM