History of AFNI updates  

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July 10, 2013 11:06AM
I'm seeing a similar behavior with the July 2, 2013 binaries. 3dANOVA3 runs and the 3dbucket command generates a final output image containing all of the contrasts, but it looks like 3dANOVA3 isn't deleting the temporary files associated with each main effect, interaction, or contrast. I tried running on an older version of AFNI (Apr 23, 2013), and found that 3dANOVA3 correctly removes the temporary files in the older version.

afni -version
Version AFNI_2011_12_21_1014
[[Precompiled binary macosx_10.7_Intel_64: Jul  2 2013]]


Script:
3dANOVA3 -type 4                                                              \
    -alevels 2                                                                \
    -blevels 3                                                                \
    -clevels 44                                                               \
    -dset  1  1  1 "tb5688.nii.gz[uns1#0_Coef]"                               \
    -dset  1  2  1 "tb5688.nii.gz[uns2#0_Coef]"                               \
    -dset  1  3  1 "tb5688.nii.gz[uns3#0_Coef]"                               \
    -dset  2  1  1 "tb5688.nii.gz[str1#0_Coef]"                               \
    -dset  2  2  1 "tb5688.nii.gz[str2#0_Coef]"                               \
    -dset  2  3  1 "tb5688.nii.gz[str3#0_Coef]"                               \
...
    -dset  1  1 44 "tb7066.nii.gz[uns1#0_Coef]"                               \
    -dset  1  2 44 "tb7066.nii.gz[uns2#0_Coef]"                               \
    -dset  1  3 44 "tb7066.nii.gz[uns3#0_Coef]"                               \
    -dset  2  1 44 "tb7066.nii.gz[str1#0_Coef]"                               \
    -dset  2  2 44 "tb7066.nii.gz[str2#0_Coef]"                               \
    -dset  2  3 44 "tb7066.nii.gz[str3#0_Coef]"                               \
    -fa condition \
    -fb block \
    -fab conditionXblock \
    -acontr -1 1 str-uns \
    -amean 1 uns \
    -amean 2 str \
    -aBcontr -1 1 : 1 str-uns_BL1 \
    -aBcontr -1 1 : 2 str-uns_BL2 \
    -aBcontr -1 1 : 3 str-uns_BL3 \
    -Abcontr 1 : -1 1 0 BL2-BL1_uns \
    -Abcontr 1 : 0 -1 1 BL3-BL2_uns \
    -Abcontr 1 : -1 0 1 BL3-BL1_uns \
    -Abcontr 2 : -1 1 0 BL2-BL1_str \
    -Abcontr 2 : 0 -1 1 BL3-BL2_str \
    -Abcontr 2 : -1 0 1 BL3-BL1_str  \
    -bucket ./exp_anova


Output:
++ 3dANOVA3: AFNI version=AFNI_2011_12_21_1014 (Jul  2 2013) [64-bit]
++ Authored by: B. Douglas Ward
Data set dimensions:  nx = 80  ny = 95  nz = 75  nxyz = 570000 
Number of input datasets = 264 

** Changes have been made for 3dANOVA3 computations of types 4 and 5.
   For details, please see:
   [afni.nimh.nih.gov]

++ Writing combined dataset into ./condition+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./block+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./conditionXblock+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./uns+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./str+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./str-uns+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./str-uns_BL1+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./str-uns_BL2+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./str-uns_BL3+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./BL2-BL1_uns+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL2_uns+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL1_uns+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./BL2-BL1_str+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL2_str+tlrc.HEAD
 + created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL1_str+tlrc.HEAD
 + created 1 FDR curves in header
Writing `bucket' dataset into ./exp_anova
RUNNING COMMAND: 3dbucket -prefix ./exp_anova ./condition+tlrc.BRIK ./block+tlrc.BRIK ./conditionXblock+tlrc.BRIK ./uns+tlrc.BRIK ./str+tlrc.BRIK ./str-uns+tlrc.BRIK ./str-uns_BL1+tlrc.BRIK ./str-uns_BL2+tlrc.BRIK ./str-uns_BL3+tlrc.BRIK ./BL2-BL1_uns+tlrc.BRIK ./BL3-BL2_uns+tlrc.BRIK ./BL3-BL1_uns+tlrc.BRIK ./BL2-BL1_str+tlrc.BRIK ./BL3-BL2_str+tlrc.BRIK ./BL3-BL1_str+tlrc.BRIK
++ 3dbucket: AFNI version=AFNI_2011_12_21_1014 (Jul  2 2013) [64-bit]
RUNNING COMMAND: 3drefit -addFDR  -sublabel 0 condition:Inten  -sublabel 1 condition:F-stat  -sublabel 2 block:Inten  -sublabel 3 block:F-stat  -sublabel 4 conditionXblock:Inten  -sublabel 5 conditionXblock:F-stat  -sublabel 6 uns:Mean  -sublabel 7 uns:t-stat  -sublabel 8 str:Mean  -sublabel 9 str:t-stat  -sublabel 10 str-uns:Contr  -sublabel 11 str-uns:t-stat  -sublabel 12 str-uns_BL1:Contr  -sublabel 13 str-uns_BL1:t-stat  -sublabel 14 str-uns_BL2:Contr  -sublabel 15 str-uns_BL2:t-stat  -sublabel 16 str-uns_BL3:Contr  -sublabel 17 str-uns_BL3:t-stat  -sublabel 18 BL2-BL1_uns:Contr  -sublabel 19 BL2-BL1_uns:t-stat  -sublabel 20 BL3-BL2_uns:Contr  -sublabel 21 BL3-BL2_uns:t-stat  -sublabel 22 BL3-BL1_uns:Contr  -sublabel 23 BL3-BL1_uns:t-stat  -sublabel 24 BL2-BL1_str:Contr  -sublabel 25 BL2-BL1_str:t-stat  -sublabel 26 BL3-BL2_str:Contr  -sublabel 27 BL3-BL2_str:t-stat  -sublabel 28 BL3-BL1_str:Contr  -sublabel 29 BL3-BL1_str:t-stat  ./exp_anova+tlrc.BRIK
++ 3drefit: AFNI version=AFNI_2011_12_21_1014 (Jul  2 2013) [64-bit]
++ Authored by: RW Cox
++ Processing AFNI dataset ./exp_anova+tlrc.BRIK
 + created 15 FDR curves in dataset header
++ 3drefit processed 1 datasets
Subject Author Posted

3dANOVA3 -bucket not working

Anonymous User July 07, 2013 01:00PM

Re: 3dANOVA3 -bucket not working

rick reynolds July 07, 2013 10:08PM

Re: 3dANOVA3 -bucket not working

Peter Molfese July 10, 2013 11:06AM

Re: 3dANOVA3 -bucket not working

Anonymous User July 10, 2013 12:30PM

Re: 3dANOVA3 -bucket not working

rick reynolds July 10, 2013 02:33PM

Re: 3dANOVA3 -bucket not working

Peter Molfese July 10, 2013 02:49PM

Re: 3dANOVA3 -bucket not working

rick reynolds July 10, 2013 03:24PM