I'm seeing a similar behavior with the July 2, 2013 binaries. 3dANOVA3 runs and the 3dbucket command generates a final output image containing all of the contrasts, but it looks like 3dANOVA3 isn't deleting the temporary files associated with each main effect, interaction, or contrast. I tried running on an older version of AFNI (Apr 23, 2013), and found that 3dANOVA3 correctly removes the temporary files in the older version.
afni -version
Version AFNI_2011_12_21_1014
[[Precompiled binary macosx_10.7_Intel_64: Jul 2 2013]]
Script:
3dANOVA3 -type 4 \
-alevels 2 \
-blevels 3 \
-clevels 44 \
-dset 1 1 1 "tb5688.nii.gz[uns1#0_Coef]" \
-dset 1 2 1 "tb5688.nii.gz[uns2#0_Coef]" \
-dset 1 3 1 "tb5688.nii.gz[uns3#0_Coef]" \
-dset 2 1 1 "tb5688.nii.gz[str1#0_Coef]" \
-dset 2 2 1 "tb5688.nii.gz[str2#0_Coef]" \
-dset 2 3 1 "tb5688.nii.gz[str3#0_Coef]" \
...
-dset 1 1 44 "tb7066.nii.gz[uns1#0_Coef]" \
-dset 1 2 44 "tb7066.nii.gz[uns2#0_Coef]" \
-dset 1 3 44 "tb7066.nii.gz[uns3#0_Coef]" \
-dset 2 1 44 "tb7066.nii.gz[str1#0_Coef]" \
-dset 2 2 44 "tb7066.nii.gz[str2#0_Coef]" \
-dset 2 3 44 "tb7066.nii.gz[str3#0_Coef]" \
-fa condition \
-fb block \
-fab conditionXblock \
-acontr -1 1 str-uns \
-amean 1 uns \
-amean 2 str \
-aBcontr -1 1 : 1 str-uns_BL1 \
-aBcontr -1 1 : 2 str-uns_BL2 \
-aBcontr -1 1 : 3 str-uns_BL3 \
-Abcontr 1 : -1 1 0 BL2-BL1_uns \
-Abcontr 1 : 0 -1 1 BL3-BL2_uns \
-Abcontr 1 : -1 0 1 BL3-BL1_uns \
-Abcontr 2 : -1 1 0 BL2-BL1_str \
-Abcontr 2 : 0 -1 1 BL3-BL2_str \
-Abcontr 2 : -1 0 1 BL3-BL1_str \
-bucket ./exp_anova
Output:
++ 3dANOVA3: AFNI version=AFNI_2011_12_21_1014 (Jul 2 2013) [64-bit]
++ Authored by: B. Douglas Ward
Data set dimensions: nx = 80 ny = 95 nz = 75 nxyz = 570000
Number of input datasets = 264
** Changes have been made for 3dANOVA3 computations of types 4 and 5.
For details, please see:
[afni.nimh.nih.gov]
++ Writing combined dataset into ./condition+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./block+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./conditionXblock+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./uns+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./str+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./str-uns+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./str-uns_BL1+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./str-uns_BL2+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./str-uns_BL3+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./BL2-BL1_uns+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL2_uns+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL1_uns+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./BL2-BL1_str+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL2_str+tlrc.HEAD
+ created 1 FDR curves in header
++ Writing combined dataset into ./BL3-BL1_str+tlrc.HEAD
+ created 1 FDR curves in header
Writing `bucket' dataset into ./exp_anova
RUNNING COMMAND: 3dbucket -prefix ./exp_anova ./condition+tlrc.BRIK ./block+tlrc.BRIK ./conditionXblock+tlrc.BRIK ./uns+tlrc.BRIK ./str+tlrc.BRIK ./str-uns+tlrc.BRIK ./str-uns_BL1+tlrc.BRIK ./str-uns_BL2+tlrc.BRIK ./str-uns_BL3+tlrc.BRIK ./BL2-BL1_uns+tlrc.BRIK ./BL3-BL2_uns+tlrc.BRIK ./BL3-BL1_uns+tlrc.BRIK ./BL2-BL1_str+tlrc.BRIK ./BL3-BL2_str+tlrc.BRIK ./BL3-BL1_str+tlrc.BRIK
++ 3dbucket: AFNI version=AFNI_2011_12_21_1014 (Jul 2 2013) [64-bit]
RUNNING COMMAND: 3drefit -addFDR -sublabel 0 condition:Inten -sublabel 1 condition:F-stat -sublabel 2 block:Inten -sublabel 3 block:F-stat -sublabel 4 conditionXblock:Inten -sublabel 5 conditionXblock:F-stat -sublabel 6 uns:Mean -sublabel 7 uns:t-stat -sublabel 8 str:Mean -sublabel 9 str:t-stat -sublabel 10 str-uns:Contr -sublabel 11 str-uns:t-stat -sublabel 12 str-uns_BL1:Contr -sublabel 13 str-uns_BL1:t-stat -sublabel 14 str-uns_BL2:Contr -sublabel 15 str-uns_BL2:t-stat -sublabel 16 str-uns_BL3:Contr -sublabel 17 str-uns_BL3:t-stat -sublabel 18 BL2-BL1_uns:Contr -sublabel 19 BL2-BL1_uns:t-stat -sublabel 20 BL3-BL2_uns:Contr -sublabel 21 BL3-BL2_uns:t-stat -sublabel 22 BL3-BL1_uns:Contr -sublabel 23 BL3-BL1_uns:t-stat -sublabel 24 BL2-BL1_str:Contr -sublabel 25 BL2-BL1_str:t-stat -sublabel 26 BL3-BL2_str:Contr -sublabel 27 BL3-BL2_str:t-stat -sublabel 28 BL3-BL1_str:Contr -sublabel 29 BL3-BL1_str:t-stat ./exp_anova+tlrc.BRIK
++ 3drefit: AFNI version=AFNI_2011_12_21_1014 (Jul 2 2013) [64-bit]
++ Authored by: RW Cox
++ Processing AFNI dataset ./exp_anova+tlrc.BRIK
+ created 15 FDR curves in dataset header
++ 3drefit processed 1 datasets