afni.nimh.nih.gov
AFNI Message Board
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
| January 08, 2014 11:55AM | |
Hi Chris,
So after GIT says it is ready if you just do 'shift+ctrl+ left click' in one of AFNI's slice windows nothing happens?
The output I get from 3dGroupInCorr right after I launch it is different from yours (see below). I get a few more lines past the thread count. The easiest thing to try is a software update followed by a new attempt. We'll see where that gets us...
cheers,
z
3dGroupInCorr -setA All_NV_Blur.grpincorr.niml -setB All_ADSD_Blur.grpincorr.niml -npb 2
++ 3dGroupInCorr: AFNI version=AFNI_2011_12_21_1014 (Jan 8 2014) [64-bit]
++ Authored by: Cox, the Mad Correlator
++ GIC: data file All_NV_Blur.grpincorr.data found with 1,102,556,960 bytes of data
++ GIC: -setA opened, contains 20 datasets, 188794 time series, 1,102,556,960 bytes
++ GIC: data file All_ADSD_Blur.grpincorr.data found with 1,102,556,960 bytes of data
++ GIC: -setB opened, contains 20 datasets, 188794 time series, 1,102,556,960 bytes
++ GIC: page faulting (reading) data into memory
+ setA:0123456789.0123456789.0123456789.0123456789.0123456789.!
+ setB:0123456789.0123456789.0123456789.0123456789.0123456789.!
++ GIC: total bytes input = 2,205,113,920 (about 2.2 billion [giga])
++ GIC: --- Be sure to start AFNI with the '-niml' command line option
+ --- [or press the NIML+PO button if you forgot '-niml']
++ Opening NIML socket 'tcp:localhost:1074' to AFNI. Connected!
++ 3dGroupInCorr stands ready to do thy bidding, O Master
!!
++ NIML connection opened from 127.0.0.1 (tcp:host:1074,AFNI_GroupInCorr_NIML)
+ GIC: OpenMP thread count = 12
++ Added 3dGroupInCorr dataset 'A_GRP_ICORR+tlrc' to controller [A2]
+ 20 datasets in set A
+ 20 datasets in set B
+ ----- AFNI is connnected to 3dGroupInCorr -----
So after GIT says it is ready if you just do 'shift+ctrl+ left click' in one of AFNI's slice windows nothing happens?
The output I get from 3dGroupInCorr right after I launch it is different from yours (see below). I get a few more lines past the thread count. The easiest thing to try is a software update followed by a new attempt. We'll see where that gets us...
cheers,
z
3dGroupInCorr -setA All_NV_Blur.grpincorr.niml -setB All_ADSD_Blur.grpincorr.niml -npb 2
++ 3dGroupInCorr: AFNI version=AFNI_2011_12_21_1014 (Jan 8 2014) [64-bit]
++ Authored by: Cox, the Mad Correlator
++ GIC: data file All_NV_Blur.grpincorr.data found with 1,102,556,960 bytes of data
++ GIC: -setA opened, contains 20 datasets, 188794 time series, 1,102,556,960 bytes
++ GIC: data file All_ADSD_Blur.grpincorr.data found with 1,102,556,960 bytes of data
++ GIC: -setB opened, contains 20 datasets, 188794 time series, 1,102,556,960 bytes
++ GIC: page faulting (reading) data into memory
+ setA:0123456789.0123456789.0123456789.0123456789.0123456789.!
+ setB:0123456789.0123456789.0123456789.0123456789.0123456789.!
++ GIC: total bytes input = 2,205,113,920 (about 2.2 billion [giga])
++ GIC: --- Be sure to start AFNI with the '-niml' command line option
+ --- [or press the NIML+PO button if you forgot '-niml']
++ Opening NIML socket 'tcp:localhost:1074' to AFNI. Connected!
++ 3dGroupInCorr stands ready to do thy bidding, O Master
!!
++ NIML connection opened from 127.0.0.1 (tcp:host:1074,AFNI_GroupInCorr_NIML)
+ GIC: OpenMP thread count = 12
++ Added 3dGroupInCorr dataset 'A_GRP_ICORR+tlrc' to controller [A2]
+ 20 datasets in set A
+ 20 datasets in set B
+ ----- AFNI is connnected to 3dGroupInCorr -----
| Subject | Author | Posted |
|---|---|---|
|
cfrum | January 08, 2014 10:53AM |
|
ziad | January 08, 2014 11:55AM |
|
cfrum | January 08, 2014 01:11PM |
|
ziad | January 08, 2014 03:32PM |
|
ziad | January 08, 2014 08:01PM |
|
cfrum | January 09, 2014 12:02PM |
