afni.nimh.nih.gov

Hi Chris,

So after GIT says it is ready if you just do 'shift+ctrl+ left click' in one of AFNI's slice windows nothing happens?

The output I get from 3dGroupInCorr right after I launch it is different from yours (see below). I get a few more lines past the thread count. The easiest thing to try is a software update followed by a new attempt. We'll see where that gets us...

cheers,
z

3dGroupInCorr -setA All_NV_Blur.grpincorr.niml -setB All_ADSD_Blur.grpincorr.niml -npb 2
++ 3dGroupInCorr: AFNI version=AFNI_2011_12_21_1014 (Jan 8 2014) [64-bit]
++ Authored by: Cox, the Mad Correlator
++ GIC: data file All_NV_Blur.grpincorr.data found with 1,102,556,960 bytes of data
++ GIC: -setA opened, contains 20 datasets, 188794 time series, 1,102,556,960 bytes
++ GIC: data file All_ADSD_Blur.grpincorr.data found with 1,102,556,960 bytes of data
++ GIC: -setB opened, contains 20 datasets, 188794 time series, 1,102,556,960 bytes
++ GIC: page faulting (reading) data into memory
+ setA:0123456789.0123456789.0123456789.0123456789.0123456789.!
+ setB:0123456789.0123456789.0123456789.0123456789.0123456789.!
++ GIC: total bytes input = 2,205,113,920 (about 2.2 billion [giga])
++ GIC: --- Be sure to start AFNI with the '-niml' command line option
+ --- [or press the NIML+PO button if you forgot '-niml']
++ Opening NIML socket 'tcp:localhost:1074' to AFNI. Connected!
++ 3dGroupInCorr stands ready to do thy bidding, O Master !!
++ NIML connection opened from 127.0.0.1 (tcp:host:1074,AFNI_GroupInCorr_NIML)
+ GIC: OpenMP thread count = 12
++ Added 3dGroupInCorr dataset 'A_GRP_ICORR+tlrc' to controller [A2]
+ 20 datasets in set A
+ 20 datasets in set B
+ ----- AFNI is connnected to 3dGroupInCorr -----