Thanks Rick, adding -regress_anaticor did work to get the WM regression going, however now I am running into another problem. When I use either -regress_anaticor or -regress_anaticor_fast the script exits before completion with this error:
3dTcat -prefix all_runs.IRK9294_63047215 pb00.IRK9294_63047215.r01.tcat+orig.HEAD
++ 3dTcat: AFNI version=AFNI_16.0.00 (Jan 1 2016) [64-bit]
3dTcat -prefix rm.all_runs.volreg
++ 3dTcat: AFNI version=AFNI_16.0.00 (Jan 1 2016) [64-bit]
** FATAL ERROR: No input datasets?
** Program compile date = Jan 1 2016
Here is the portion of the output script that this is coming from:
# create an all_runs dataset to match the fitts, errts, etc.
3dTcat -prefix all_runs.$subj pb00.$subj.r*.tcat+orig.HEAD
# --------------------------------------------------
# generate fast ANATICOR result: errts.$subj.fanaticor+orig
# --------------------------------------------------
# fast ANATICOR: generate local WMe time series averages
# create catenated volreg dataset
3dTcat -prefix rm.all_runs.volreg
I can't seem to figure out what input datasets it is missing and how to fix that.
Thanks again!
Edited 1 time(s). Last edit at 01/26/2016 01:01PM by krasmussn.
