HI, Rick,
Thank you very much for your suggestion. I do not use afni_proc.py or uber_subject.py to analyze the single subject data. But I have the brainmask for each subject. Does it mean the input should be the group_based mask? Then what I should use for the input? I guess that the input consists of all the subjects individual masks. Am I correct?
For my case, each subject has the corresponding structure file, such as: subj1_Brainmask+tlrc. subj2_Brainmask+tlrc. subj3_Brainmask+tlrc. I do not know how to use them as the input....
Any good pointers?
Thank you very much
-j
