Hi, List Experts,
Could you advise how I can use to3d to convert DICOM to nii format? I attempted to use the command.
to3d -prefix EPI_Sub1 -time: zt nz nt TR alt+z Input_DIC
I am NOT clear how to know whether my slices are in the order "z-axis first, then t-axis" or the contrary "t-axis first, then z-axis". Also, how to decide whether I should use alt+z, or alt+z2....? I read the help but am still unclear. Could I directly write the code adding two new arguments?
to3d -prefix EPI_Sub1 -time: zt nz nt TR alt+z - assume_dicom_mosaic -save_outliers outlier_fname Input_DIC
Thanks a lot,
Juan
