History of AFNI updates  

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December 21, 2016 10:04AM
Peter, it's better to start with a simple model first and see if it works, especially in this case with minimum amount of data.

> We model monkey to account for differences (and to see if there is an outlier); but the
> flip-side if this is that this factor hopefully "soaks up" variance attributable to monkey.

When "monkey" is not directly specified in the model as a fixed- or random-effects factor, it does not mean that the variability among the monkeys is not accounted for. Instead the variability is explained in the residuals. Directly modeling it as a fixed-effects factor requires more model parameters, leading to unstable estimation in the process, and you don't have enough data to play with.

> -ranEff '~1+Monk|Subj'

Just try

-ranEff '~1' \

and you should feel blessed if you get something interesting in the end.

Gang



Edited 1 time(s). Last edit at 12/21/2016 10:08AM by Gang.
Subject Author Posted

3dLME random effects and nesting

PeterK December 15, 2016 01:21PM

Re: 3dLME random effects and nesting

gang December 16, 2016 03:55PM

Re: 3dLME random effects and nesting

PeterK December 19, 2016 11:02AM

Re: 3dLME random effects and nesting

gang December 20, 2016 08:54AM

Re: 3dLME random effects and nesting

PeterK December 20, 2016 02:20PM

Re: 3dLME random effects and nesting

gang December 21, 2016 10:04AM

Re: 3dLME random effects and nesting

PeterK December 22, 2016 10:16AM