AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
January 04, 2017 10:10AM
This is the problem: "(I just have 141 .nii files for each subject)".
It has nothing to do with .gz.

You do not have a dataset that is a single run, but have 141
separate volumes. Put them into a single dataset before
running uber_subject.py or afni_proc.py. Specify the TR when
doing this:

3dTcat -TR XXXX -prefix run1 volume*.nii.gz

- rick
Subject Author Posted

Creating a single .nii.gz from .nii files

heretic133 January 04, 2017 03:15AM

Re: Creating a single .nii.gz from .nii files

rick reynolds January 04, 2017 07:57AM

Re: Creating a single .nii.gz from .nii files

heretic133 January 04, 2017 09:42AM

Re: Creating a single .nii.gz from .nii files

rick reynolds January 04, 2017 10:10AM

Re: Creating a single .nii.gz from .nii files

heretic133 January 04, 2017 10:31AM

Re: Creating a single .nii.gz from .nii files

heretic133 January 04, 2017 11:53AM

Re: Creating a single .nii.gz from .nii files

Daniel Glen January 04, 2017 03:04PM

Re: Creating a single .nii.gz from .nii files

heretic133 January 07, 2017 02:23PM

Re: Creating a single .nii.gz from .nii files

rick reynolds January 07, 2017 05:35PM