AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
May 24, 2017 06:47PM
Hi Peter and Paul,
Thank you once again for the clarification and help.

In my case where the B0ref is the base and the dwi scan is the input, would you think the forward transform from 3dAllineate is appropriate or backwards? When I took my T2 (aligned to B0ref) as my input and applied the inverse of the 3dAllineate matrix I was able to get it aligned to my original DWIs. This seems similar to your situation, in which case the forward may make more sense.

Thanks,
Ajay



Edited 5 time(s). Last edit at 05/26/2017 09:11AM by AjaySK.
Subject Author Posted

1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK April 13, 2017 02:06AM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

ptaylor April 13, 2017 09:22AM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK April 13, 2017 05:28PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

ptaylor April 13, 2017 09:04PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK May 23, 2017 05:53PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK May 23, 2017 06:16PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

ptaylor May 23, 2017 07:03PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK May 24, 2017 01:39AM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

ptaylor May 24, 2017 08:17AM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

ptaylor May 23, 2017 06:57PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

Peter Molfese May 24, 2017 11:10AM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK May 24, 2017 06:47PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK May 26, 2017 03:56PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

Peter Molfese May 26, 2017 04:50PM

Re: 1dDW_Grad_O_Mat++ and missing -proc_dset flag

AjaySK July 28, 2017 10:15AM