History of AFNI updates  

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March 05, 2018 01:45PM
It's a little more complicated than that. The dataset is stored with a scale factor as bytes, and each ROI sub-brick has a different scale factor. Use this method instead to extract the region.

3dcalc -a $HOME/abin//TT_desai_ddpmaps+tlrc'[ctx_lh_G_insular_short]' -prefix insular_short -float -overwrite -expr 'step(a-0.3)'

3drefit -denote insular_short+tlrc.

That particular atlas has a very long history in the header, so I just trimmed it away with the 3drefit command.
Subject Author Posted

Draw ROI in afni using atlases

Zhang Yu March 01, 2018 04:54AM

Re: Draw ROI in afni using atlases

Daniel Glen March 01, 2018 02:03PM

Re: Draw ROI in afni using atlases

Zhang Yu March 01, 2018 03:40PM

Re: Draw ROI in afni using atlases

Daniel Glen March 01, 2018 04:44PM

Re: Draw ROI in afni using atlases

Zhang Yu March 02, 2018 03:10AM

Re: Draw ROI in afni using atlases

Daniel Glen March 05, 2018 12:00PM

Re: Draw ROI in afni using atlases

Zhang Yu March 05, 2018 12:55PM

Re: Draw ROI in afni using atlases

Daniel Glen March 05, 2018 01:45PM

Brainnetome Atlas! Attachments

Daniel Glen March 05, 2018 06:37PM

Re: Brainnetome Atlas!

Zhang Yu March 09, 2018 04:36AM