Hi Daniel,
Thanks for your reply!
I've tried the dataset you mentioned. But it occured fatal error when processing:
3dmask_tool -input mask_CSFe_resam+tlrc mask_import_Tvent+tlrc -inter -prefix mask_inter_Svent
++ processing 2 input datasets...
++ padding all datasets by 0 (for dilations)
** FATAL ERROR: nvoxel mis-match
It seems the number of voxel of the two masks do not mach? Do I need to resample the template you mentioned at first? I have already used 3dresample to make it to 2.5mm as the example does.
Thanks!
-Tracy