AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 14, 2018 04:55PM
Hi Dustin,

> For each event, I could extract the mean Z value for eventPPI>baseline or I can extract the mean Z
> from the post hoc t-tests. Do you know which would be better?

It's more straightforward to extract each effect of interest from the post hoc test, and use that as input for BayesianGroupAna.

> So I'm also interested in the effect of group on the above tests as well and, to make it even more
> complicated, I'd like to add a continuous (e.g., age) or interval (e.g., likert-type scale) variable as well.

Just dummy-code your groups with 0s and 1s (or -1s and 1s), and use the coding, together with other quantitative variables for BayesianGroupAna.

> for a voxelwise group PPI analysis would you recommend I take the PPI>baseline or individual level
> contrasts to the group level. With the PPI>baseline then I'd have a lot of repeated measures and I
> should probably use 3dLME, whereas with the contrasts I could probably get away with 3dMEMA.

Either way is fine, but with slightly different assumptions.

Gang
Subject Author Posted

BayesianGroupAna and gPPI question

dmoracze May 14, 2018 03:57PM

Re: BayesianGroupAna and gPPI question

gang May 14, 2018 04:55PM

Re: BayesianGroupAna and gPPI question

dmoracze August 14, 2018 11:04AM

Re: BayesianGroupAna and gPPI question

gang August 14, 2018 05:07PM

Re: BayesianGroupAna and gPPI question

dmoracze August 15, 2018 07:14AM

Re: BayesianGroupAna and gPPI question

gang August 16, 2018 09:54AM