AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 30, 2018 03:54AM
Hi all,

I post this question for some statistical discussion on the nature of PPI (psychophysical interaction analysis).
During PPI analysis, the task regressor was also entered as a covariate to tease apart the connectivity originating co-activation during task.
The task regressor was modeled using hymodynamic functions such as GAMMA.
As the hymodynamic function can not fit our brain response very well, the task regressor can not explain all the co-activation variance.
Thus, the PPI we got may still be a by-product of task-coactivation.

So how about do the PPI in two steps?
First, we use a TENT function to best fit the activation in every TR during a trial to best explain the variance induced by task condition and all other covariates.
Second, we use the residual time-course in the first step to do PPI analysis.

Of course, statistically, the two step can be done within one GLM.
The main point is the necessity of using TENT to best explain the task-induced activation.

I would appreciate if you can shed some lights to me.

BEST,
lz
Subject Author Posted

about the rationale of PPI analysis

lzhyoung May 30, 2018 03:54AM

Re: about the rationale of PPI analysis

rick reynolds June 04, 2018 04:25PM

Re: about the rationale of PPI analysis

lzhyoung June 04, 2018 08:33PM

Re: about the rationale of PPI analysis

rick reynolds June 04, 2018 08:59PM

Re: about the rationale of PPI analysis

lzhyoung June 06, 2018 03:42AM