AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 24, 2019 12:09PM
An easy way to get a listing of all ROIs across all of the atlases that you have loaded is:

whereami -show_atlas_code

Hypothalamus isn't that common in the atlases that I usually look through, but you could take the TT version and transform it using either 3dWarp's -tta2mni option or by creating a transform (preferably with either auto_warp.py or 3dQwarp) and apply that tranform to move your region of interest from one space to another.
Subject Author Posted

whereami: make MNI ROI

Robin January 24, 2019 10:52AM

Re: whereami: make MNI ROI

Peter Molfese January 24, 2019 12:09PM

Re: whereami: make MNI ROI

Daniel Glen January 24, 2019 06:24PM

Re: whereami: make MNI ROI

Emmanuelle Renauld February 01, 2019 11:06AM

Re: whereami: make MNI ROI

Daniel Glen February 01, 2019 02:18PM

Re: whereami: make MNI ROI

lhopkins February 02, 2019 08:59PM

Re: whereami: make MNI ROI

Daniel Glen February 03, 2019 09:05PM

Re: whereami: make MNI ROI

lhopkins February 04, 2019 07:55PM

Re: whereami: make MNI ROI

Daniel Glen February 04, 2019 11:11PM