AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 14, 2019 12:53PM
Hi Paul,

Thanks for your input!

Great regarding the cluster sizes and that I have got the correct sources for citation!

Regarding running two 1-sided t-tests: We almost always use the 2-sided tables that are generated from clustsim. Perhaps we can get away with a 1-sided on some of our tasks but we have chosen to basically always use 2-sided since we are interesed in differencies in both directions. Hope that sounds reasonable.

Yeah "Q3" wasn't really a question. It was just to illustrate that we agree that it is unreasonable to throw away findings that e.g. is one voxel from surviving or are only significant with an alpha of 0.06-7, especially if it is a bileteral finding in predicted areas. My point though, was that it might be tricky with some reviewers since we can't, even though it is close, write that the finding is FWE corrected within AFNI because what we can cite is only the three sources above and they call for a p-value no larger than 0.002. And I can't really cite a discussion like this. So now we are thiking about how to phrase thse situations in upcoming manuscripts without downlplaying the finding too much. A finding that might be a false negative since the method is kind of conservative (at least that is our experience so far).



Edited 1 time(s). Last edit at 02/14/2019 12:54PM by Robin.
Subject Author Posted

AFNI and the pursuit of significant findings

Robin February 08, 2019 03:16AM

Re: AFNI and the pursuit of significant findings

gang February 08, 2019 12:55PM

Re: AFNI and the pursuit of significant findings

Robin February 12, 2019 12:30PM

Re: AFNI and the pursuit of significant findings

gang February 13, 2019 03:00PM

Re: AFNI and the pursuit of significant findings

Robin February 14, 2019 03:53AM

Re: AFNI and the pursuit of significant findings

ptaylor February 14, 2019 09:48AM

Re: AFNI and the pursuit of significant findings

Robin February 14, 2019 12:53PM

Re: AFNI and the pursuit of significant findings

gang February 14, 2019 01:59PM

Re: AFNI and the pursuit of significant findings

Robin February 14, 2019 02:40PM